STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8JS48Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
A0A4S8IQG6
Uncharacterized protein.
      
 0.519
A0A4S8JAL9
ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family.
      
 0.519
A0A4V4H5P4
Uncharacterized protein.
      
 0.516
A0A4S8J9M4
TP6A_N domain-containing protein.
      
 0.485
A0A4S8J1F7
Uncharacterized protein.
      
 0.477
A0A4S8K2U2
Uncharacterized protein.
      
 0.477
A0A4S8IXT9
TP6A_N domain-containing protein.
      
 0.473
TOP6A
DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
      
 0.468
A0A4S8K0K3
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.468
A0A4S8KG98
Uncharacterized protein.
      
 0.432
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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