STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K0X8Uncharacterized protein. (388 aa)    
Predicted Functional Partners:
A0A4S8JUX4
MIF4G domain-containing protein.
    
 0.787
A0A4S8K2J9
Uncharacterized protein.
    
 0.743
A0A4S8J319
Nuclear cap-binding protein subunit 2.
    
 0.734
A0A4S8J4D3
Nuclear cap-binding protein subunit 2.
    
 0.734
A0A4S8IZX3
TOG domain-containing protein.
   
 0.721
A0A4S8JZ29
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 0.708
A0A4S8IW41
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
   
 0.701
A0A4S8JVK4
RRM domain-containing protein.
  
 
 0.676
A0A4S8IX40
RRM domain-containing protein.
  
 
 0.675
A0A4S8IVH7
RRM domain-containing protein.
  
 
 0.647
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.