STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K4C9Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (730 aa)    
Predicted Functional Partners:
A0A4S8IEI8
BHLH domain-containing protein.
   
 0.987
A0A4S8JAJ2
Uncharacterized protein.
   
0.987
A0A4S8IA41
Uncharacterized protein.
   
0.984
A0A4S8JMB5
Uncharacterized protein.
   
0.984
A0A4S8IHZ5
Uncharacterized protein.
   
 0.979
A0A4S8JAV5
Uncharacterized protein.
   
 0.979
A0A4S8K5P4
WD_REPEATS_REGION domain-containing protein.
   
 0.979
A0A4S8K5Q8
WD_REPEATS_REGION domain-containing protein.
   
 0.979
A0A4S8IHD2
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.974
A0A4S8JCN1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.974
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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