STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K4M2RING-CH-type domain-containing protein. (220 aa)    
Predicted Functional Partners:
A0A4S8ISJ9
Uncharacterized protein.
    
 
 0.619
A0A4S8IZ85
NOT2_3_5 domain-containing protein.
    
 
 0.619
A0A4S8JYR2
Thioredoxin domain-containing protein.
    
 
 0.589
A0A4S8IYS5
UBX domain-containing protein.
    
 
 0.485
A0A4S8J2C0
Uncharacterized protein.
    
 
 0.485
A0A4S8J3P3
UBX domain-containing protein.
    
 
 0.485
A0A4S8JUB5
UBX domain-containing protein.
    
 
 0.485
A0A4S8KEH2
UBX domain-containing protein.
    
 
 0.485
A0A4S8INA8
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.465
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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