A0A4S8K6F1 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8K6F1

Uncharacterized protein. (759 aa)

Predicted Functional Partners:

A0A4S8ITA5

0.516

A0A4S8JB31

0.501

A0A4S8KDK8

0.469

A0A4S8IHB1

0.440

A0A4S8K795

0.436

A0A4S8J2G2

0.423

A0A4S8IRT6

0.422

A0A4S8IC00

0.421

A0A4S8IDV8

0.421

A0A4S8IED6

0.421

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8IC00	A0A4S8IDV8	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.872
A0A4S8IC00	A0A4S8K6F1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.421
A0A4S8IDV8	A0A4S8IC00	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.872
A0A4S8IDV8	A0A4S8K6F1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.421
A0A4S8IED6	A0A4S8K6F1	Mitogen-activated protein kinase.	Uncharacterized protein.	0.421
A0A4S8IHB1	A0A4S8ITA5	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A4S8IHB1	A0A4S8J2G2	Uncharacterized protein.	COMM domain-containing protein.	0.496
A0A4S8IHB1	A0A4S8JB31	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A4S8IHB1	A0A4S8K6F1	Uncharacterized protein.	Uncharacterized protein.	0.440
A0A4S8IRT6	A0A4S8K6F1	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A4S8ITA5	A0A4S8IHB1	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A4S8ITA5	A0A4S8J2G2	Uncharacterized protein.	COMM domain-containing protein.	0.435
A0A4S8ITA5	A0A4S8K6F1	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A4S8ITA5	A0A4S8KDK8	Uncharacterized protein.	Uncharacterized protein.	0.519
A0A4S8J2G2	A0A4S8IHB1	COMM domain-containing protein.	Uncharacterized protein.	0.496
A0A4S8J2G2	A0A4S8ITA5	COMM domain-containing protein.	Uncharacterized protein.	0.435
A0A4S8J2G2	A0A4S8JB31	COMM domain-containing protein.	Uncharacterized protein.	0.424
A0A4S8J2G2	A0A4S8K6F1	COMM domain-containing protein.	Uncharacterized protein.	0.423
A0A4S8JB31	A0A4S8IHB1	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A4S8JB31	A0A4S8J2G2	Uncharacterized protein.	COMM domain-containing protein.	0.424