STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K6R1Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (286 aa)    
Predicted Functional Partners:
A0A4S8K4B2
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.866
A0A4S8IFD4
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.796
A0A4S8JXN7
Uncharacterized protein.
   
 
 0.796
A0A4S8K3L7
Uncharacterized protein.
   
 
 0.796
A0A4S8KD46
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.796
A0A4S8JS59
Clathrin-link domain-containing protein.
    
 0.640
A0A4S8JUW0
Clathrin-link domain-containing protein.
    
 0.640
A0A4S8K435
Uncharacterized protein.
    
 0.640
A0A4S8KCT0
Clathrin-link domain-containing protein.
    
 0.640
A0A4S8KDC5
Clathrin-link domain-containing protein.
    
 0.640
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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