STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H301Rep-A_N domain-containing protein. (272 aa)    
Predicted Functional Partners:
A0A4S8I9M4
RPA_C domain-containing protein.
   
 0.979
A0A4S8IYT1
OB domain-containing protein.
   
 0.979
A0A4S8JRI1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.935
A0A4S8ICG5
Uncharacterized protein.
    
 0.921
A0A4S8JTV4
Uncharacterized protein.
    
 0.910
A0A4S8JTW6
Uncharacterized protein.
    
 0.910
A0A4S8JQ51
Uncharacterized protein.
    
  0.892
A0A4S8K6X0
Uncharacterized protein.
    
  0.887
A0A4S8ITQ1
DNA helicase; Belongs to the MCM family.
   
 0.884
A0A4S8KBW2
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
 
   
  0.881
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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