STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H4F4Pectinesterase. (548 aa)    
Predicted Functional Partners:
A0A4S8ITX8
Pectate lyase.
  
 
  0.842
A0A4S8IRH7
Pectate lyase.
   
 
  0.803
A0A4S8JBI5
Pectate lyase.
   
 
  0.803
A0A4S8IJ98
Uncharacterized protein.
    
 0.731
A0A4S8KE67
Pectate lyase.
   
 
  0.715
A0A4S8KGF2
Pectate lyase.
   
 
  0.715
A0A4S8JMM3
Uncharacterized protein.
    
 0.685
A0A4S8KEU4
Uncharacterized protein.
    
 0.685
A0A4S8IVN7
Pectate lyase.
  
 
  0.670
A0A4S8KFH7
Uncharacterized protein.
   
   0.640
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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