STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H5W7Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. (492 aa)    
Predicted Functional Partners:
A0A4S8IJ98
Uncharacterized protein.
    
 0.731
A0A4S8JMM3
Uncharacterized protein.
    
 0.685
A0A4S8KEU4
Uncharacterized protein.
    
 0.685
A0A4S8KFH7
Uncharacterized protein.
   
   0.640
A0A4S8KGZ9
Uncharacterized protein.
   
   0.640
A0A4S8JYJ6
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.633
A0A4V4H442
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.633
A0A4S8JKT9
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.620
A0A4S8K889
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.610
A0A4V4H6X5
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.610
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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