A0A4V4H8K4 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4V4H8K4

AvrRpt-cleavage domain-containing protein. (269 aa)

Predicted Functional Partners:

A0A4V4H6G0

0.904

A0A4S8JGQ2

0.892

A0A4S8JTZ6

0.892

A0A4S8KH11

0.846

A0A4S8I5C2

0.588

A0A4S8IIT5

0.588

A0A4S8IIY0

0.588

A0A4S8IJZ9

0.588

A0A4S8IKZ1

0.588

A0A4S8INT5

0.588

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8I5C2	A0A4V4H8K4	Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8IIT5	A0A4V4H8K4	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8IIY0	A0A4V4H8K4	AP2/ERF domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8IJZ9	A0A4V4H8K4	AP2/ERF domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8IKZ1	A0A4V4H8K4	Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8INT5	A0A4V4H8K4	AP2/ERF domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.588
A0A4S8JGQ2	A0A4V4H8K4	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	AvrRpt-cleavage domain-containing protein.	0.892
A0A4S8JTZ6	A0A4V4H8K4	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	AvrRpt-cleavage domain-containing protein.	0.892
A0A4S8KH11	A0A4V4H8K4	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	AvrRpt-cleavage domain-containing protein.	0.846
A0A4V4H6G0	A0A4V4H8K4	RING-type domain-containing protein.	AvrRpt-cleavage domain-containing protein.	0.904
A0A4V4H8K4	A0A4S8I5C2	AvrRpt-cleavage domain-containing protein.	Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.	0.588
A0A4V4H8K4	A0A4S8IIT5	AvrRpt-cleavage domain-containing protein.	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	0.588
A0A4V4H8K4	A0A4S8IIY0	AvrRpt-cleavage domain-containing protein.	AP2/ERF domain-containing protein.	0.588
A0A4V4H8K4	A0A4S8IJZ9	AvrRpt-cleavage domain-containing protein.	AP2/ERF domain-containing protein.	0.588
A0A4V4H8K4	A0A4S8IKZ1	AvrRpt-cleavage domain-containing protein.	Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.	0.588
A0A4V4H8K4	A0A4S8INT5	AvrRpt-cleavage domain-containing protein.	AP2/ERF domain-containing protein.	0.588
A0A4V4H8K4	A0A4S8JGQ2	AvrRpt-cleavage domain-containing protein.	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	0.892
A0A4V4H8K4	A0A4S8JTZ6	AvrRpt-cleavage domain-containing protein.	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	0.892
A0A4V4H8K4	A0A4S8KH11	AvrRpt-cleavage domain-containing protein.	Uncharacterized protein; Belongs to the disease resistance NB-LRR family.	0.846
A0A4V4H8K4	A0A4V4H6G0	AvrRpt-cleavage domain-containing protein.	RING-type domain-containing protein.	0.904