STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H8M0C2H2-type domain-containing protein. (296 aa)    
Predicted Functional Partners:
A0A4S8IJ45
Nop domain-containing protein.
   
 
 0.819
A0A4S8JUY1
Nop domain-containing protein.
   
 
 0.819
A0A4S8KCG1
Uncharacterized protein.
   
 
 0.785
A0A4S8KCH9
Uncharacterized protein.
   
 
 0.785
A0A4S8KGU2
G-patch domain-containing protein.
   
 
 0.727
A0A4S8J8K3
RRM domain-containing protein.
   
   0.659
A0A4S8J1Z3
Nop domain-containing protein.
   
 
 0.656
A0A4S8K807
G domain-containing protein.
   
 
 0.649
A0A4S8KG80
CP-type G domain-containing protein.
   
 
 0.649
A0A4S8IPE3
Uncharacterized protein.
   
    0.640
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.