STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H9Z3DNA ligase. (750 aa)    
Predicted Functional Partners:
A0A4S8IXE9
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.992
A0A4S8JHW6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.992
A0A4S8JNW6
Uncharacterized protein.
  
 0.986
A0A4S8K1I9
XPGN domain-containing protein.
  
 0.986
A0A4S8KFG8
Uncharacterized protein.
  
 0.986
A0A4S8JQE6
Uncharacterized protein.
   
 0.984
A0A4S8J722
DNA polymerase.
   
 0.973
A0A4S8JSS6
Protein kinase domain-containing protein.
   
 0.973
A0A4S8IPV4
PARP-type domain-containing protein.
  
 0.970
A0A4S8JSH9
Uncharacterized protein.
  
 0.970
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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