STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_003418040S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (86 aa)    
Predicted Functional Partners:
BN2166_0019650
Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family.
   
   0.982
BN2166_0047820
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.982
BN2166_0003380
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.978
BN2166_0052060
Uncharacterized protein.
   
 
 0.974
BN2166_0049340
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.966
BN2166_0026830
Uncharacterized protein.
    
 0.960
BN2166_0004370
annotation not available
    
   0.957
BN2166_0030500
BY PROTMAP: gi|342321069|gb|EGU13007.1| Cytoplasmic protein [Rhodotorula glutinis ATCC 204091].
    
   0.957
BN2166_0047690
Bystin-domain containing protein.
    
 
 0.957
BN2166_0002440
Ribosomal_L7Ae domain-containing protein.
   
   0.952
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.