STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0003700BY PROTMAP: gi|647397007|emb|CDR39774.1| RHTO0S04e09164g1_1 [Rhodosporidium toruloides]; Belongs to the GST superfamily. (286 aa)    
Predicted Functional Partners:
BN2166_0057640
annotation not available
   
 0.864
BN2166_0015250
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.742
BN2166_0015260
FGENESH: predicted gene_2.695 protein.
   
 0.742
BN2166_0059590
annotation not available
   
 0.711
BN2166_0057190
Glutathione synthetase.
    
 0.670
BN2166_0041630
Homogentisate 1,2-dioxygenase.
  
 
 0.649
BN2166_0039660
FGENESH: predicted gene_7.351 protein.
    
 0.644
BN2166_0061030
BY PROTMAP: gi|342321152|gb|EGU13087.1| mRNA export factor elf1 [Rhodotorula glutinis ATCC 204091].
   
 
 0.629
BN2166_0061020
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.629
BN2166_0045780
annotation not available
   
 
 0.624
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.