Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN2166_0000530 | BN2166_0002400 | A0A0K3C6C1 | A0A0K3C479 | annotation not available | RNA polymerase II-associated protein. | 0.996 |
| BN2166_0000530 | BN2166_0004080 | A0A0K3C6C1 | A0A0K3C793 | annotation not available | Leo1-like protein-domain containing protein. | 0.996 |
| BN2166_0000530 | BN2166_0006970 | A0A0K3C6C1 | A0A0K3CCG1 | annotation not available | annotation not available | 0.971 |
| BN2166_0000530 | BN2166_0010510 | A0A0K3C6C1 | A0A0K3C9I1 | annotation not available | Pol II transcription elongation factor. | 0.994 |
| BN2166_0000530 | BN2166_0022560 | A0A0K3C6C1 | A0A0K3CCX5 | annotation not available | BY PROTMAP: gi|814539372|emb|CEQ43229.1| SPOSA6832_05140 [Sporidiobolus salmonicolor]. | 0.965 |
| BN2166_0000530 | BN2166_0022570 | A0A0K3C6C1 | A0A0K3CGU4 | annotation not available | FGENESH: predicted gene_4.33 protein. | 0.965 |
| BN2166_0000530 | BN2166_0027980 | A0A0K3C6C1 | A0A0K3CEE5 | annotation not available | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.962 |
| BN2166_0000530 | BN2166_0048520 | A0A0K3C6C1 | A0A0K3CP74 | annotation not available | annotation not available | 0.967 |
| BN2166_0000530 | BN2166_0065610 | A0A0K3C6C1 | A0A0K3CQE5 | annotation not available | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.994 |
| BN2166_0000530 | BN2166_0069460 | A0A0K3C6C1 | A0A0K3CRG5 | annotation not available | RNA pol II accessory factor, Cdc73 family-domain containing protein. | 0.996 |
| BN2166_0002400 | BN2166_0000530 | A0A0K3C479 | A0A0K3C6C1 | RNA polymerase II-associated protein. | annotation not available | 0.996 |
| BN2166_0002400 | BN2166_0004080 | A0A0K3C479 | A0A0K3C793 | RNA polymerase II-associated protein. | Leo1-like protein-domain containing protein. | 0.998 |
| BN2166_0002400 | BN2166_0006970 | A0A0K3C479 | A0A0K3CCG1 | RNA polymerase II-associated protein. | annotation not available | 0.943 |
| BN2166_0002400 | BN2166_0010510 | A0A0K3C479 | A0A0K3C9I1 | RNA polymerase II-associated protein. | Pol II transcription elongation factor. | 0.993 |
| BN2166_0002400 | BN2166_0022560 | A0A0K3C479 | A0A0K3CCX5 | RNA polymerase II-associated protein. | BY PROTMAP: gi|814539372|emb|CEQ43229.1| SPOSA6832_05140 [Sporidiobolus salmonicolor]. | 0.967 |
| BN2166_0002400 | BN2166_0022570 | A0A0K3C479 | A0A0K3CGU4 | RNA polymerase II-associated protein. | FGENESH: predicted gene_4.33 protein. | 0.967 |
| BN2166_0002400 | BN2166_0027980 | A0A0K3C479 | A0A0K3CEE5 | RNA polymerase II-associated protein. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.942 |
| BN2166_0002400 | BN2166_0048520 | A0A0K3C479 | A0A0K3CP74 | RNA polymerase II-associated protein. | annotation not available | 0.953 |
| BN2166_0002400 | BN2166_0065610 | A0A0K3C479 | A0A0K3CQE5 | RNA polymerase II-associated protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.989 |
| BN2166_0002400 | BN2166_0069460 | A0A0K3C479 | A0A0K3CRG5 | RNA polymerase II-associated protein. | RNA pol II accessory factor, Cdc73 family-domain containing protein. | 0.997 |
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