STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0002110Mannosyltransferase. (543 aa)    
Predicted Functional Partners:
BN2166_0056970
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly. Required for cell wall integrity.
    
 
 0.571
BN2166_0070620
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 
 0.571
BN2166_0017410
Mannosyltransferase.
    
 
 0.567
BN2166_0012960
FGENESH: predicted gene_2.465 protein.
    
 
 0.560
BN2166_0004990
GPI biosynthesis protein family Pig-F-domain containing protein.
      
 0.539
BN2166_0057590
BY PROTMAP: gi|342320249|gb|EGU12191.1| Oxidoreductase [Rhodotorula glutinis ATCC 204091].
      
 0.539
BN2166_0071030
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.539
BN2166_0024570
Putative phosphatidylinositol N-acetylglucosaminyltransferase.
    
 
 0.531
BN2166_0051110
Phosphatidylinositolglycan class N (PIG-N)-domain containing protein.
    
 
 0.519
BN2166_0063710
BY PROTMAP: gi|342319520|gb|EGU11468.1| GPI-anchor transamidase [Rhodotorula glutinis ATCC 204091].
      
 0.499
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.