STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0005530Mitochondrial inner membrane protease ATP23; Has a dual role in the assembly of mitochondrial ATPase. Belongs to the peptidase M76 family. (207 aa)    
Predicted Functional Partners:
BN2166_0024420
FGENESH: predicted gene_4.218 protein.
    
 
 0.685
BN2166_0018150
ATP10 protein-domain containing protein.
    
 
 0.684
BN2166_0032250
Prohibitin.
    
 
 0.653
BN2166_0056020
Prohibitin.
    
 
 0.653
BN2166_0064310
Mitochondrial intermediate peptidase.
      
 0.539
BN2166_0074490
BY PROTMAP: gi|472584786|gb|EMS22361.1| dipeptidyl-peptidase III [Rhodosporidium toruloides NP11].
      
 0.539
BN2166_0002180
Inner membrane translocase subunit.
   
 
 0.532
BN2166_0061950
60Kd inner membrane protein-domain containing protein.
   
 
 0.501
BN2166_0012530
Peptidase family M48-domain containing protein.
    
 
 0.492
BN2166_0038330
annotation not available
    
 
 0.488
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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