STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0009930Heat shock protein 70 family; Belongs to the heat shock protein 70 family. (660 aa)    
Predicted Functional Partners:
BN2166_0059190
Belongs to the chaperonin (HSP60) family.
  
 0.987
BN2166_0000940
BY PROTMAP: gi|647395603|emb|CDR37157.1| RHTO0S02e11342g1_1 [Rhodosporidium toruloides].
 0.983
BN2166_0031740
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.981
BN2166_0007020
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
   
 0.979
BN2166_0042430
annotation not available
    
 0.966
BN2166_0026830
Uncharacterized protein.
   
  0.964
BN2166_0007190
annotation not available
   
 0.941
BN2166_0007120
Cytochrome c oxidase polypeptide IV.
   
 
 0.939
BN2166_0070180
FGENESH: predicted gene_16.44 protein.
  
0.923
BN2166_0001690
annotation not available
  
 0.916
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.