STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0010330BY PROTMAP: gi|342319909|gb|EGU11854.1| DUF1275 domain protein [Rhodotorula glutinis ATCC 204091]. (265 aa)    
Predicted Functional Partners:
BN2166_0006550
BY PROTMAP: gi|647396154|emb|CDR38177.1| RHTO0S03e05160g1_1 [Rhodosporidium toruloides].
  
 0.717
BN2166_0011840
annotation not available
  
 0.717
BN2166_0072560
Iron-containing alcohol dehydrogenase-domain containing protein.
  
 0.717
BN2166_0042320
Belongs to the TPP enzyme family.
   
 
 0.613
BN2166_0059290
BY PROTMAP: gi|647397537|emb|CDR40626.1| RHTO0S05e05622g1_1 [Rhodosporidium toruloides].
   
 0.583
BN2166_0007860
annotation not available
    
 0.566
BN2166_0062080
annotation not available
    
 0.566
BN2166_0064730
BY PROTMAP: gi|647400787|emb|CDR46538.1| RHTO0S12e05864g1_1 [Rhodosporidium toruloides].
    
 0.566
BN2166_0041430
Acetolactate synthase.
     
 0.552
BN2166_0064750
Belongs to the TPP enzyme family.
     
 0.552
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.