STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0009610Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2364 aa)    
Predicted Functional Partners:
BN2166_0015400
WD40-repeat-containing domain protein.
    
 0.998
BN2166_0029140
BY PROTMAP: gi|342321001|gb|EGU12939.1| WD-repeat protein mip1 [Rhodotorula glutinis ATCC 204091].
   
 0.998
BN2166_0053830
Stress-activated map kinase interacting protein 1 (SIN1)-domain containing protein.
    
 0.996
BN2166_0020570
Serine/threonine-protein kinase ATG1.
    
 0.994
BN2166_0042730
FGENESH: predicted gene_8.128 protein.
   
 0.994
BN2166_0058840
annotation not available
    
 0.991
BN2166_0061330
BY PROTMAP: gi|342321137|gb|EGU13072.1| Ras-2 [Rhodotorula glutinis ATCC 204091].
    
 0.988
BN2166_0056840
Uncharacterized protein.
   
 0.974
BN2166_0034540
Non-specific serine/threonine protein kinase.
    
 0.970
BN2166_0017010
annotation not available
    
 0.961
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.