STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0016690annotation not available (553 aa)    
Predicted Functional Partners:
BN2166_0040630
Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
BN2166_0006200
FGENESH: predicted gene_1.620 protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
BN2166_0042760
Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
BN2166_0072460
annotation not available
   
 0.998
BN2166_0055690
Translation initiation factor 2 gamma subunit.
    
 0.997
BN2166_0001500
annotation not available
   
 0.997
BN2166_0009190
BY PROTMAP: gi|647397974|emb|CDR41467.1| RHTO0S06e02124g1_1 [Rhodosporidium toruloides].
   
 0.981
BN2166_0009420
FGENESH: predicted gene_2.111 protein.
   
 0.981
BN2166_0007990
Tryptophan synthase.
    
  0.782
BN2166_0017450
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.
  
 
 0.737
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.