STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0026350Amine oxidase. (781 aa)    
Predicted Functional Partners:
BN2166_0000450
annotation not available
     
 0.734
BN2166_0046910
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.708
BN2166_0042530
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.707
BN2166_0058690
BY PROTMAP: gi|814542705|emb|CEQ39736.1| SPOSA6832_01283 [Sporidiobolus salmonicolor].
     
 0.696
BN2166_0067040
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.678
BN2166_0014700
Pyridoxal-dependent decarboxylase, pyridoxal binding domain-domain containing protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 
 0.615
BN2166_0044690
FGENESH: predicted gene_8.324 protein.
     
 0.613
BN2166_0051410
Uncharacterized protein.
   
 
 0.602
BN2166_0043620
Amino_oxidase domain-containing protein.
   
 
 0.587
BN2166_0045680
Arginase; Belongs to the arginase family.
     
 0.578
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.