STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0001120BY PROTMAP: gi|647395577|emb|CDR37101.1| RHTO0S02e10792g1_1 [Rhodosporidium toruloides]. (1586 aa)    
Predicted Functional Partners:
BN2166_0034040
annotation not available
  
0.990
BN2166_0066550
FGENESH: predicted gene_14.205 protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
0.974
BN2166_0066340
Protein kinase-like domain-containing protein.
  
0.964
BN2166_0047500
FGENESH: predicted gene_9.96 protein.
    
 0.936
BN2166_0035960
annotation not available
  
0.922
BN2166_0053470
BY PROTMAP: gi|599157340|gb|EYE96449.1| ras small GTPase [Aspergillus ruber CBS 135680].
    
 0.859
BN2166_0005860
Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.
    
 0.842
BN2166_0001750
BY PROTMAP: gi|342320661|gb|EGU12600.1| STE/STE11 protein kinase [Rhodotorula glutinis ATCC 204091].
  
 
0.820
BN2166_0035760
Protein kinase domain-containing protein.
  
 
 
0.815
BN2166_0009850
Uncharacterized protein.
    
 0.776
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.