Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BN2166_0011870 | BN2166_0016440 | A0A0K3CDU2 | A0A0K3CAA7 | annotation not available | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.996 |
BN2166_0011870 | BN2166_0017230 | A0A0K3CDU2 | A0A0K3CB55 | annotation not available | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.994 |
BN2166_0011870 | BN2166_0017890 | A0A0K3CDU2 | A0A0K3CAM4 | annotation not available | annotation not available | 0.985 |
BN2166_0011870 | BN2166_0020240 | A0A0K3CDU2 | A0A0K3CB93 | annotation not available | annotation not available | 0.996 |
BN2166_0011870 | BN2166_0023890 | A0A0K3CDU2 | A0A0K3CC97 | annotation not available | annotation not available | 0.996 |
BN2166_0011870 | BN2166_0046210 | A0A0K3CDU2 | A0A0K3CJR4 | annotation not available | Belongs to the protein kinase superfamily. | 0.981 |
BN2166_0011870 | BN2166_0062550 | A0A0K3CDU2 | A0A0K3CL71 | annotation not available | TFIIH subunit Tfb4/p34. | 0.996 |
BN2166_0011870 | BN2166_0062610 | A0A0K3CDU2 | A0A0K3CPM3 | annotation not available | annotation not available | 0.994 |
BN2166_0011870 | BN2166_0067080 | A0A0K3CDU2 | A0A0K3CQ89 | annotation not available | annotation not available | 0.996 |
BN2166_0011870 | BN2166_0070710 | A0A0K3CDU2 | A0A0K3CRT1 | annotation not available | TFIIE alpha subunit-domain containing protein. | 0.994 |
BN2166_0016440 | BN2166_0011870 | A0A0K3CAA7 | A0A0K3CDU2 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.996 |
BN2166_0016440 | BN2166_0017230 | A0A0K3CAA7 | A0A0K3CB55 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.997 |
BN2166_0016440 | BN2166_0017890 | A0A0K3CAA7 | A0A0K3CAM4 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.981 |
BN2166_0016440 | BN2166_0020240 | A0A0K3CAA7 | A0A0K3CB93 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.997 |
BN2166_0016440 | BN2166_0023890 | A0A0K3CAA7 | A0A0K3CC97 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.995 |
BN2166_0016440 | BN2166_0046210 | A0A0K3CAA7 | A0A0K3CJR4 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Belongs to the protein kinase superfamily. | 0.966 |
BN2166_0016440 | BN2166_0062550 | A0A0K3CAA7 | A0A0K3CL71 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | TFIIH subunit Tfb4/p34. | 0.997 |
BN2166_0016440 | BN2166_0062610 | A0A0K3CAA7 | A0A0K3CPM3 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.990 |
BN2166_0016440 | BN2166_0067080 | A0A0K3CAA7 | A0A0K3CQ89 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | annotation not available | 0.994 |
BN2166_0016440 | BN2166_0070710 | A0A0K3CAA7 | A0A0K3CRT1 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | TFIIE alpha subunit-domain containing protein. | 0.994 |
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