STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0029050Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (121 aa)    
Predicted Functional Partners:
BN2166_0060620
RHTO0S05e08812g1_1; Belongs to the complex I LYR family.
   
 0.999
BN2166_0017440
FGENESH: predicted gene_3.195 protein.
   
 0.999
BN2166_0044130
GRIM-19.
   
 0.999
BN2166_0004780
annotation not available
   
 0.998
BN2166_0034470
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.998
BN2166_0057830
NADH-ubiquinone oxidoreductase 21kDa subunit.
   
 0.998
BN2166_0048970
Malonyl CoA-acyl carrier protein transacylase.
  
 0.998
BN2166_0072930
Belongs to the complex I 30 kDa subunit family.
   
 0.998
BN2166_0036870
RHTO0S07e03070g1_1.
   
 0.997
BN2166_0013450
ETC complex I subunit conserved region-domain containing protein.
   
 0.997
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.