STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0020660BY PROTMAP: gi|647398251|emb|CDR41975.1| RHTO0S06e08416g2_1 [Rhodosporidium toruloides]; Belongs to the OSBP family. (1237 aa)    
Predicted Functional Partners:
BN2166_0001460
annotation not available
    
 0.997
BN2166_0001690
annotation not available
   
 0.967
BN2166_0066230
PapD-like protein.
    
 0.959
BN2166_0037100
Zinc-finger of mitochondrial splicing suppressor 51-domain containing protein.
 
      0.886
BN2166_0038620
Cyclin-dependent protein kinase inhibitor.
   
 0.784
BN2166_0002630
annotation not available
    
  0.769
BN2166_0016990
FGENESH: predicted gene_3.150 protein.
    
  0.769
BN2166_0030480
FGENESH: predicted gene_5.593 protein.
    
  0.769
BN2166_0057580
CrcB-like protein-domain containing protein.
    
  0.769
BN2166_0048030
Valosin-containing protein; Belongs to the AAA ATPase family.
   
 0.741
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.