STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0024810Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
BN2166_0037290
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
    
 0.898
BN2166_0011610
Putative phospholipase.
     
 0.766
BN2166_0051020
Uncharacterized protein.
     
 0.761
BN2166_0021720
BCS1 N terminal-domain containing protein; Belongs to the AAA ATPase family.
      
 0.514
BN2166_0000500
PlsC domain-containing protein.
     
 0.485
BN2166_0053530
Acyltransferase-domain containing protein.
     
 0.485
BN2166_0061620
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.474
BN2166_0006460
BY PROTMAP: gi|647396163|emb|CDR38186.1| RHTO0S03e05358g1_1 [Rhodosporidium toruloides].
      
 0.449
BN2166_0003660
Integral membrane protein S linking to the trans Golgi network-domain containing protein.
      
 0.446
BN2166_0018330
Hsp70 protein-domain containing protein; Belongs to the heat shock protein 70 family.
    
  0.427
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.