STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0037000Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
BN2166_0024530
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
 
 
 0.998
BN2166_0060330
BY PROTMAP: gi|761930019|gb|KIY50995.1| 26S proteasome subunit P45 [Fistulina hepatica ATCC 64428]; Belongs to the AAA ATPase family.
 
 
 0.997
BN2166_0019410
BY PROTMAP: gi|342320107|gb|EGU12050.1| Endopeptidase [Rhodotorula glutinis ATCC 204091]; Belongs to the AAA ATPase family.
 
 
 0.991
BN2166_0070740
BY PROTMAP: gi|357620831|gb|EHJ72875.1| 26S protease regulatory subunit [Danaus plexippus]; Belongs to the AAA ATPase family.
 
 
 0.990
BN2166_0047840
BY PROTMAP: gi|342319959|gb|EGU11904.1| Proteasome 26S subunit [Rhodotorula glutinis ATCC 204091].
   
 0.985
BN2166_0069290
Multidrug resistance protein.
   
 0.983
BN2166_0059900
Proteasome subunit alpha type.
   
 0.976
BN2166_0039530
ATP-dependent 26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
 
 
 0.976
BN2166_0023860
annotation not available
   
 0.975
BN2166_0003150
Proteasome subunit alpha type.
   
 0.974
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.