STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0030460BY PROTMAP: gi|342321067|gb|EGU13005.1| putative Hst3 protein [Rhodotorula glutinis ATCC 204091]. (509 aa)    
Predicted Functional Partners:
BN2166_0070900
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
  
 
0.820
BN2166_0072520
FGENESH: predicted gene_17.110 protein.
   
 0.772
BN2166_0061650
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
   
 0.769
BN2166_0008180
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.752
BN2166_0059420
FGENESH: predicted gene_12.102 protein.
  
 
 0.751
BN2166_0021460
DHS-like NAD/FAD-binding domain-containing protein.
   
 
 0.748
BN2166_0046190
FGENESH: predicted gene_8.474 protein.
  
 
0.742
BN2166_0055440
FGENESH: predicted gene_11.40 protein.
    
  0.735
BN2166_0055430
Elongation factor 1-gamma 1.
    
  0.735
BN2166_0038480
annotation not available
    
 0.731
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.