STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0030710Protein-tyrosine phosphatase-like protein. (823 aa)    
Predicted Functional Partners:
BN2166_0033290
BY PROTMAP: gi|342319654|gb|EGU11601.1| AGC/NDR protein kinase [Rhodotorula glutinis ATCC 204091].
   
 0.985
BN2166_0010750
Uncharacterized protein.
   
 
 0.978
BN2166_0053470
BY PROTMAP: gi|599157340|gb|EYE96449.1| ras small GTPase [Aspergillus ruber CBS 135680].
    
 0.976
BN2166_0021680
BY PROTMAP: gi|342321674|gb|EGU13606.1| Wee1 [Rhodotorula glutinis ATCC 204091].
    
 
 0.972
BN2166_0038840
BY PROTMAP: gi|342320475|gb|EGU12415.1| Bub2 protein [Rhodotorula glutinis ATCC 204091].
    
 
 0.972
BN2166_0010680
BY PROTMAP: gi|342319928|gb|EGU11873.1| Cysteine peptidase C50 [Rhodotorula glutinis ATCC 204091].
   
 0.965
BN2166_0034850
BY PROTMAP: gi|814541751|emb|CEQ40977.1| SPOSA6832_02642, partial [Sporidiobolus salmonicolor].
    
 0.955
BN2166_0034640
Uncharacterized protein.
   
 0.938
BN2166_0055130
BY PROTMAP: gi|342320165|gb|EGU12107.1| Protein kinase Ukc1p [Rhodotorula glutinis ATCC 204091].
   
 0.938
BN2166_0030520
annotation not available
    
 
 0.918
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.