STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0049150annotation not available (841 aa)    
Predicted Functional Partners:
BN2166_0007990
Tryptophan synthase.
 
 0.999
BN2166_0036290
ADC synthase.
 0.999
BN2166_0023670
annotation not available
0.999
BN2166_0056920
Anthranilate phosphoribosyltransferase.
 
 0.999
BN2166_0027040
Chorismate synthase.
  
 
 0.977
BN2166_0072030
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
  
 
 0.973
BN2166_0055160
BY PROTMAP: gi|814542660|emb|CEQ40209.1| SPOSA6832_01811, partial [Sporidiobolus salmonicolor].
  
 
 0.972
BN2166_0054840
Glycine hydroxymethyltransferase.
  
 
 0.962
BN2166_0002190
Pyridoxal phosphate-dependent transferase.
    
 0.961
BN2166_0002480
BY PROTMAP: gi|647396872|emb|CDR39519.1| RHTO0S04e05974g1_1 [Rhodosporidium toruloides].
    
 0.961
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.