STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0053300AP-1 complex subunit gamma. (849 aa)    
Predicted Functional Partners:
BN2166_0070100
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.997
BN2166_0052950
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.997
BN2166_0057070
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
 
  
 0.977
BN2166_0034270
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.976
BN2166_0063130
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
0.976
BN2166_0016610
annotation not available
   
 0.966
BN2166_0038930
BY PROTMAP: gi|814542916|emb|CEQ39947.1| SPOSA6832_01515, partial [Sporidiobolus salmonicolor]; Belongs to the adaptor complexes medium subunit family.
   
 0.962
BN2166_0007960
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.960
BN2166_0047960
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.953
BN2166_0006230
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.950
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.