Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BN2166_0007270 | BN2166_0008520 | A0A0K3CCI1 | A0A0K3CCU7 | annotation not available | annotation not available | 0.515 |
BN2166_0007270 | BN2166_0008530 | A0A0K3CCI1 | A0A0K3C8N8 | annotation not available | FGENESH: predicted gene_2.22 protein. | 0.515 |
BN2166_0007270 | BN2166_0030570 | A0A0K3CCI1 | A0A0K3CJ27 | annotation not available | Yae1_N domain-containing protein. | 0.510 |
BN2166_0007270 | BN2166_0034410 | A0A0K3CCI1 | A0A0K3CGC8 | annotation not available | Glycine cleavage T-protein. | 0.443 |
BN2166_0007270 | BN2166_0046650 | A0A0K3CCI1 | A0A0K3CGJ9 | annotation not available | Cytosolic Fe-S cluster assembly factor FGENESH: predicted gene_9.11; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily. | 0.699 |
BN2166_0007270 | DRE2 | A0A0K3CCI1 | A0A0K3C6M2 | annotation not available | Fe-S cluster assembly protein DRE2; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex CFD1-NBP35. Electrons are transferred to DRE2 from NADPH via the FAD- and FMN-containing protein TAH18. TAH18-DRE2 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by [...] | 0.539 |
BN2166_0008520 | BN2166_0007270 | A0A0K3CCU7 | A0A0K3CCI1 | annotation not available | annotation not available | 0.515 |
BN2166_0008520 | BN2166_0008530 | A0A0K3CCU7 | A0A0K3C8N8 | annotation not available | FGENESH: predicted gene_2.22 protein. | 0.931 |
BN2166_0008520 | BN2166_0010340 | A0A0K3CCU7 | A0A0K3C8H9 | annotation not available | Putative tRNA 2'-phosphotransferase. | 0.590 |
BN2166_0008520 | BN2166_0027420 | A0A0K3CCU7 | A0A0K3CI41 | annotation not available | Yae1_N domain-containing protein. | 0.590 |
BN2166_0008520 | BN2166_0030570 | A0A0K3CCU7 | A0A0K3CJ27 | annotation not available | Yae1_N domain-containing protein. | 0.796 |
BN2166_0008530 | BN2166_0007270 | A0A0K3C8N8 | A0A0K3CCI1 | FGENESH: predicted gene_2.22 protein. | annotation not available | 0.515 |
BN2166_0008530 | BN2166_0008520 | A0A0K3C8N8 | A0A0K3CCU7 | FGENESH: predicted gene_2.22 protein. | annotation not available | 0.931 |
BN2166_0008530 | BN2166_0010340 | A0A0K3C8N8 | A0A0K3C8H9 | FGENESH: predicted gene_2.22 protein. | Putative tRNA 2'-phosphotransferase. | 0.590 |
BN2166_0008530 | BN2166_0027420 | A0A0K3C8N8 | A0A0K3CI41 | FGENESH: predicted gene_2.22 protein. | Yae1_N domain-containing protein. | 0.590 |
BN2166_0008530 | BN2166_0030570 | A0A0K3C8N8 | A0A0K3CJ27 | FGENESH: predicted gene_2.22 protein. | Yae1_N domain-containing protein. | 0.796 |
BN2166_0010340 | BN2166_0008520 | A0A0K3C8H9 | A0A0K3CCU7 | Putative tRNA 2'-phosphotransferase. | annotation not available | 0.590 |
BN2166_0010340 | BN2166_0008530 | A0A0K3C8H9 | A0A0K3C8N8 | Putative tRNA 2'-phosphotransferase. | FGENESH: predicted gene_2.22 protein. | 0.590 |
BN2166_0010340 | BN2166_0030570 | A0A0K3C8H9 | A0A0K3CJ27 | Putative tRNA 2'-phosphotransferase. | Yae1_N domain-containing protein. | 0.992 |
BN2166_0010340 | BN2166_0046650 | A0A0K3C8H9 | A0A0K3CGJ9 | Putative tRNA 2'-phosphotransferase. | Cytosolic Fe-S cluster assembly factor FGENESH: predicted gene_9.11; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily. | 0.566 |
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