STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0049090Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (928 aa)    
Predicted Functional Partners:
BN2166_0054120
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.869
BN2166_0007810
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.865
BN2166_0046410
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.817
BN2166_0009000
Phosphotransferase.
    
 0.806
BN2166_0060160
Phosphotransferase.
    
 0.806
BN2166_0004400
6-phosphofructokinase; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade "E" sub-subfamily.
    
 0.804
BN2166_0002130
BY PROTMAP: gi|647394874|emb|CDR36108.1| RHTO0S01e14400g1_1 [Rhodosporidium toruloides].
  
  
 
0.792
BN2166_0039120
Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
     
 0.789
BN2166_0031020
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
     
 0.788
BN2166_0024090
FGENESH: predicted gene_4.185 protein; Belongs to the phosphohexose mutase family.
  
 
 0.773
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.