STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0047230ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (524 aa)    
Predicted Functional Partners:
BN2166_0008780
ATP synthase subunit gamma.
 
 0.999
BN2166_0021410
F1 complex, OSCP/delta subunit of ATPase.
  
 0.999
BN2166_0008870
ATP synthase, Delta/Epsilon chain, beta-sandwich domain-domain containing protein.
  
 0.999
BN2166_0033540
ATP synthase F0 sector subunit 4.
   
 0.999
BN2166_0034590
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 0.999
BN2166_0040570
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
0.999
BN2166_0025260
Mitochondrial ATP synthase epsilon chain-domain containing protein.
   
 0.998
BN2166_0006350
Uncharacterized protein.
   
 0.997
BN2166_0038800
Regulator ustilago maydis 1 protein.
  
 0.997
BN2166_0055550
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
  
 0.994
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.