STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0058150Belongs to the asparaginase 1 family. (396 aa)    
Predicted Functional Partners:
BN2166_0070530
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
 0.751
BN2166_0042040
BY PROTMAP: gi|647395953|emb|CDR37887.1| RHTO0S03e00672g1_1 [Rhodosporidium toruloides].
  
 
  0.724
BN2166_0045830
Argininosuccinate synthase.
   
 
 0.715
BN2166_0036520
BY PROTMAP: gi|342320569|gb|EGU12509.1| Asparagine synthase [Rhodotorula glutinis ATCC 204091].
     
 0.713
BN2166_0050170
annotation not available
   
  0.703
BN2166_0032400
Aspartate/glutamate/uridylate kinase.
     
 0.696
BN2166_0005030
Aspartate aminotransferase.
     
 0.695
BN2166_0029250
Aspartate aminotransferase.
     
 0.695
BN2166_0048320
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
  0.690
BN2166_0006960
BY PROTMAP: gi|342319323|gb|EGU11272.1| Proteophosphoglycan ppg1 [Rhodotorula glutinis ATCC 204091].
    
 0.689
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.