STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0053680BY PROTMAP: gi|342319196|gb|EGU11146.1| 5-oxoprolinase [Rhodotorula glutinis ATCC 204091]. (781 aa)    
Predicted Functional Partners:
BN2166_0044250
BY PROTMAP: gi|472581411|gb|EMS19150.1| 5-oxoprolinase [Rhodosporidium toruloides NP11].
 
  
  0.965
BN2166_0053670
BY PROTMAP: gi|342319197|gb|EGU11147.1| Cytoplasmic protein [Rhodotorula glutinis ATCC 204091].
 
  
  0.965
BN2166_0072610
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.810
BN2166_0056370
annotation not available
    
 0.801
BN2166_0056430
annotation not available
    
 0.778
BN2166_0056520
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.778
BN2166_0001800
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.777
BN2166_0061190
Lincomycin-condensing protein lmbA.
    
 0.776
BN2166_0052740
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
  0.765
BN2166_0052730
FGENESH: predicted gene_10.110 protein.
   
 
  0.765
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.