STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0054580ABC transporter transmembrane region 2-domain containing protein. (797 aa)    
Predicted Functional Partners:
BN2166_0019150
BY PROTMAP: gi|472586672|gb|EMS24191.1| ABC fatty acid transporter [Rhodosporidium toruloides NP11].
  
 
0.951
BN2166_0004920
Pex19 protein family-domain containing protein.
    
 0.822
BN2166_0071580
Microbody peroxisome biogenesis protein peroxin 3.
   
 0.785
BN2166_0027260
BY PROTMAP: gi|814539755|emb|CEQ42878.1| SPOSA6832_04754, partial [Sporidiobolus salmonicolor].
   
 
 0.726
BN2166_0063850
Pex14_N domain-containing protein.
   
 0.726
BN2166_0058100
annotation not available
   
 
 0.721
BN2166_0059250
annotation not available
    
 0.713
BN2166_0003820
Peroxisomal membrane protein PEX16.
     
 0.701
BN2166_0044980
Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.697
BN2166_0058940
Cyclin-dependent protein kinase inhibitor.
   
 
 0.695
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.