STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0058580Phosphatase and actin regulator. (784 aa)    
Predicted Functional Partners:
BN2166_0074660
Acyl-CoA N-acyltransferase.
   
 0.995
BN2166_0052040
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.952
BN2166_0026000
annotation not available
    
 0.729
BN2166_0038060
Actin cytoskeleton organization protein.
   
  
 0.584
BN2166_0052770
BY PROTMAP: gi|342319233|gb|EGU11183.1| acetyltransferase [Rhodotorula glutinis ATCC 204091].
   
  
 0.540
BN2166_0040780
N-acetyltransferase.
      
 0.538
BN2166_0049130
annotation not available
      
 0.444
BN2166_0002710
ADP-ribosylation factor family-domain containing protein; Belongs to the small GTPase superfamily. Arf family.
     
 0.435
BN2166_0071580
Microbody peroxisome biogenesis protein peroxin 3.
   
    0.434
BN2166_0022830
annotation not available
   
    0.430
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.