STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0068350annotation not available (1501 aa)    
Predicted Functional Partners:
BN2166_0042240
BY PROTMAP: gi|342321621|gb|EGU13554.1| HORMA domain protein [Rhodotorula glutinis ATCC 204091].
   
 0.998
BN2166_0074190
WD40 repeat-like protein.
   
 0.997
BN2166_0016210
annotation not available
    
 0.992
BN2166_0036530
Putative 20S cyclosome subunit BimA/Nuc2/Cdc27.
    
 0.992
BN2166_0020330
HEC/Ndc80p family-domain containing protein.
   
 0.990
BN2166_0028730
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.990
BN2166_0060000
WD40-repeat-containing domain protein.
   
 0.989
BN2166_0019610
Spindle assembly checkpoint component Mad1.
    
 0.988
BN2166_0042300
Cell division control protein 16.
    
 0.988
BN2166_0062410
annotation not available
    
 0.987
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.