STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0066690annotation not available (463 aa)    
Predicted Functional Partners:
BN2166_0053460
Mss4-like protein.
    
   0.875
BN2166_0073200
Serine/threonine-protein phosphatase.
    
 
 0.747
BN2166_0014780
annotation not available
   
 0.736
BN2166_0056780
Alternative oxidase.
   
 0.736
BN2166_0001460
annotation not available
   
 0.678
BN2166_0054980
BY PROTMAP: gi|647394255|emb|CDR35483.1| RHTO0S01e00254g1_1 [Rhodosporidium toruloides].
    
 0.677
BN2166_0039240
Pyruvate dehydrogenase.
    
 0.671
BN2166_0074650
Formyl transferase.
  
   0.611
BN2166_0026250
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.605
BN2166_0062930
Stretch-activated Ca2+-permeable channel component-domain containing protein.
   
 0.599
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.