STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0073900Glutathione-S-transferase. (346 aa)    
Predicted Functional Partners:
BN2166_0015170
annotation not available
 
      0.900
BN2166_0055440
FGENESH: predicted gene_11.40 protein.
   
 
 0.708
BN2166_0055430
Elongation factor 1-gamma 1.
   
 
 0.708
BN2166_0004830
FGENESH: predicted gene_1.483 protein; Belongs to the GST superfamily.
   
 
 0.690
BN2166_0003700
BY PROTMAP: gi|647397007|emb|CDR39774.1| RHTO0S04e09164g1_1 [Rhodosporidium toruloides]; Belongs to the GST superfamily.
   
 
 0.573
BN2166_0003710
annotation not available
   
 
 0.573
BN2166_0061640
annotation not available
   
 
 0.573
BN2166_0066090
Glutathione S-transferase C-terminal-like protein.
   
 
 0.573
BN2166_0065960
FGENESH: predicted gene_14.146 protein; Belongs to the GST superfamily.
   
 
 0.573
BN2166_0058980
annotation not available
   
 
 0.561
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.