STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0068040FGENESH: predicted gene_15.85 protein. (103 aa)    
Predicted Functional Partners:
BN2166_0010140
Uncharacterized protein.
   
   0.962
BN2166_0000720
annotation not available
   
   0.962
BN2166_0027440
NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)-domain containing protein.
   
   0.948
BN2166_0044040
annotation not available
   
   0.947
BN2166_0013450
ETC complex I subunit conserved region-domain containing protein.
   
   0.940
BN2166_0043680
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.927
BN2166_0042980
Putative NADH-ubiquinone oxidoreductase; Belongs to the complex I 49 kDa subunit family.
   
   0.896
BN2166_0004780
annotation not available
   
   0.895
BN2166_0062620
Belongs to the complex I LYR family.
   
   0.885
BN2166_0013870
annotation not available
   
   0.882
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.