STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0065580annotation not available (197 aa)    
Predicted Functional Partners:
BN2166_0027020
BY PROTMAP: gi|647403442|emb|CDR49556.1| RHTO0S28e00342g1_1 [Rhodosporidium toruloides].
    
 0.995
BN2166_0010860
BY PROTMAP: gi|342319938|gb|EGU11883.1| histidine kinase [Rhodotorula glutinis ATCC 204091].
    
 0.988
BN2166_0041040
HSF-type DNA-binding-domain containing protein.
    
 0.960
BN2166_0057140
annotation not available
 
      0.851
BN2166_0060430
BY PROTMAP: gi|472586253|gb|EMS23781.1| protein-histidine kinase [Rhodosporidium toruloides NP11].
    
 0.739
BN2166_0035960
annotation not available
    
 
 0.716
BN2166_0036240
FGENESH: predicted gene_7.9 protein.
    
 0.673
BN2166_0040340
Serine/threonine kinase with two-component sensor domain.
    
 0.673
BN2166_0058070
Putative histidine kinase HHK6p.
    
 0.673
BN2166_0001750
BY PROTMAP: gi|342320661|gb|EGU12600.1| STE/STE11 protein kinase [Rhodotorula glutinis ATCC 204091].
    
 
 0.628
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.