Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BN2166_0002550 | BN2166_0030610 | A0A0K3C489 | A0A0K3CF98 | HRDC-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
BN2166_0002550 | BN2166_0033120 | A0A0K3C489 | A0A0K3CJT8 | HRDC-like protein. | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | 0.997 |
BN2166_0002550 | BN2166_0045780 | A0A0K3C489 | A0A0K3CJ91 | HRDC-like protein. | annotation not available | 0.996 |
BN2166_0002550 | BN2166_0046550 | A0A0K3C489 | A0A061BG80 | HRDC-like protein. | RHTO0S21e02696g1_1. | 0.996 |
BN2166_0002550 | BN2166_0050150 | A0A0K3C489 | A0A0K3CHL4 | HRDC-like protein. | FGENESH: predicted gene_9.361 protein. | 0.997 |
BN2166_0002550 | BN2166_0066080 | A0A0K3C489 | A0A0K3CPX8 | HRDC-like protein. | BY PROTMAP: gi|342318992|gb|EGU10944.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. | 0.406 |
BN2166_0015330 | BN2166_0035390 | A0A0K3CAK0 | A0A0K3CFE1 | annotation not available | BY PROTMAP: gi|342319749|gb|EGU11696.1| Nitrate reductase [Rhodotorula glutinis ATCC 204091]. | 0.980 |
BN2166_0015330 | BN2166_0055390 | A0A0K3CAK0 | A0A0K3CL47 | annotation not available | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.953 |
BN2166_0015330 | BN2166_0066080 | A0A0K3CAK0 | A0A0K3CPX8 | annotation not available | BY PROTMAP: gi|342318992|gb|EGU10944.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. | 0.447 |
BN2166_0030610 | BN2166_0002550 | A0A0K3CF98 | A0A0K3C489 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | HRDC-like protein. | 0.996 |
BN2166_0030610 | BN2166_0033120 | A0A0K3CF98 | A0A0K3CJT8 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | 0.998 |
BN2166_0030610 | BN2166_0045780 | A0A0K3CF98 | A0A0K3CJ91 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | annotation not available | 0.998 |
BN2166_0030610 | BN2166_0046550 | A0A0K3CF98 | A0A061BG80 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RHTO0S21e02696g1_1. | 0.996 |
BN2166_0030610 | BN2166_0050150 | A0A0K3CF98 | A0A0K3CHL4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FGENESH: predicted gene_9.361 protein. | 0.996 |
BN2166_0030610 | BN2166_0066080 | A0A0K3CF98 | A0A0K3CPX8 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BY PROTMAP: gi|342318992|gb|EGU10944.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. | 0.433 |
BN2166_0030610 | BN2166_0068260 | A0A0K3CF98 | A0A0K3CR67 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FGENESH: predicted gene_15.107 protein. | 0.638 |
BN2166_0033120 | BN2166_0002550 | A0A0K3CJT8 | A0A0K3C489 | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | HRDC-like protein. | 0.997 |
BN2166_0033120 | BN2166_0030610 | A0A0K3CJT8 | A0A0K3CF98 | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
BN2166_0033120 | BN2166_0045780 | A0A0K3CJT8 | A0A0K3CJ91 | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | annotation not available | 0.997 |
BN2166_0033120 | BN2166_0046550 | A0A0K3CJT8 | A0A061BG80 | BY PROTMAP: gi|647399978|emb|CDR45008.1| RHTO0S10e04126g1_1 [Rhodosporidium toruloides]. | RHTO0S21e02696g1_1. | 0.997 |
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