STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0051170BY PROTMAP: gi|342321247|gb|EGU13181.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]. (437 aa)    
Predicted Functional Partners:
BN2166_0007370
Modifier of rudimentary (Mod(R)) protein-domain containing protein.
    
 0.648
BN2166_0020660
BY PROTMAP: gi|647398251|emb|CDR41975.1| RHTO0S06e08416g2_1 [Rhodosporidium toruloides]; Belongs to the OSBP family.
    
 0.635
BN2166_0030940
Dimer_Tnp_hAT domain-containing protein.
    
 0.597
BN2166_0074280
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
  0.569
BN2166_0073620
annotation not available
    
  0.569
BN2166_0004240
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.568
BN2166_0001380
Uncharacterized protein.
    
 0.560
BN2166_0016430
Uncharacterized protein.
    
 0.560
BN2166_0073930
FGENESH: predicted gene_18.44 protein.
    
 0.560
BN2166_0044010
annotation not available
    
 0.513
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.