STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0053520annotation not available (374 aa)    
Predicted Functional Partners:
BN2166_0007990
Tryptophan synthase.
    
  0.829
BN2166_0017740
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.702
BN2166_0033140
annotation not available
  
 0.702
BN2166_0004000
FGENESH: predicted gene_1.400 protein.
  
 
 0.678
BN2166_0036920
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
  0.630
BN2166_0031910
annotation not available
    
 0.623
BN2166_0034030
FGENESH: predicted gene_6.325 protein.
    
 0.623
BN2166_0026820
Branched-chain amino acid aminotransferase II.
    
 0.623
BN2166_0052100
annotation not available
  
 
 0.622
BN2166_0063280
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.622
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.