STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0058820annotation not available (435 aa)    
Predicted Functional Partners:
BN2166_0070530
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.922
BN2166_0031560
BY PROTMAP: gi|342319603|gb|EGU11550.1| Glutamate-tRNA ligase [Rhodotorula glutinis ATCC 204091]; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.744
BN2166_0021070
BY PROTMAP: gi|342321706|gb|EGU13638.1| Glutamine-tRNA ligase [Rhodotorula glutinis ATCC 204091]; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.744
BN2166_0064440
tRNA synthetases class I (E and Q), catalytic domain-domain containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.744
BN2166_0007140
BY PROTMAP: gi|647394924|emb|CDR36159.1| RHTO0S01e15544g1_1 [Rhodosporidium toruloides].
   
 0.718
BN2166_0029030
annotation not available
   
 0.718
BN2166_0070870
annotation not available
   
 0.718
BN2166_0034710
FGENESH: predicted gene_6.393 protein.
   
 0.713
BN2166_0020300
Carbamoyl-phosphate synthase.
   
 
  0.681
BN2166_0011790
BY PROTMAP: gi|342321391|gb|EGU13325.1| Spermidine synthase [Rhodotorula glutinis ATCC 204091].
   
 
  0.681
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.