STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FK69Histone H3. (150 aa)    
Predicted Functional Partners:
A0A5C5G124
Uncharacterized protein.
    
 0.944
A0A5C5FJE8
PHD-type domain-containing protein.
    
 0.884
A0A5C5FX41
JmjN domain-containing protein.
    
 0.870
A0A5C5G6L6
Uncharacterized protein.
    
 0.868
A0A5C5FQ48
Histone H2A; Belongs to the histone H2A family.
 
 
 0.855
A0A5C5FLA1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.839
A0A5C5FTU3
Histone H2B; Belongs to the histone H2B family.
 
 
 0.833
A0A5C5FVA6
WD40-repeat-containing domain protein.
   
 0.826
A0A5C5FTX6
Regulator ustilago maydis 1 protein.
   
 0.823
A0A5C5FRK0
SET domain-containing protein.
   
 0.820
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.