STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FNF8GLE1-like protein-domain-containing protein. (670 aa)    
Predicted Functional Partners:
A0A5C5FUY8
Uncharacterized protein.
    
 0.999
A0A5C5FUJ4
Uncharacterized protein.
    
 0.983
A0A5C5G1R1
RanBD1 domain-containing protein.
    
 0.983
A0A5C5FW36
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.971
A0A5C5FXB9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 
 0.969
A0A5C5G0H4
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 
 0.961
A0A5C5G510
Nucleoporin complex subunit 54-domain-containing protein.
   
 0.955
A0A5C5FSN6
Methyltransferase type 11.
   
 0.948
A0A5C5G0L1
Poly(A)+ RNA export protein.
   
 0.941
A0A5C5G964
WD40 repeat-like protein.
   
 0.941
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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